Applications and Uses
The below is not an exhaustive list of supported applications, if you do not see the one you are interested listed please contact us at [email protected] to further discuss.
Computational Finance
| Application | Description | Support Features | Multi-GPU |
|---|---|---|---|
| Aon Benfield Pathwise™ | Specialized platform for real-time hedging, valuation, pricing and risk management | Spreadsheet-like modeling interfaces, Python-based scripting environment and Grid middleware | Yes |
| Altimesh’s Hybridizer C# | Multi-target C# framework for data parallel computing | C# with translation to GPU or Multi-Core Xeon | Yes |
| Elsen Accelerated Computing Engine™ | Secure, accessible, and accelerated back- testing, scenario analysis, risk analytics and real-time trading designed for easy integration and rapid development | Web-like API with Native bindings for Python, R, Scala, C. Custom models and data streams are easy to add | Yes |
| Global Valuation Esther | In-memory risk analytics system for OTC portfolios with a particular focus on XVA metrics and balance sheet simulations | High quality models not admitting closed form solutions, efficient solvers based on full matrix linear algebra powered by GPUs and Monte Carlo algorithms | Yes |
| Hanweck Associates | Real-time options analytical engine (Volera) | Real-time options analytics engine | Yes |
| MiAccLib 2.0.1 | Accelerated libraries which encompasses high speed multi-algorithm search engines, data security engine and also video analytics engines for text processing, encryption/decryption and video surveillance respectively. | Text Processing: Exact Match, Approximate\Similarity Text, Wild Card, MultiKeyword and MultiColumnMultiKeyword, etc Data Security: Accelerated Encryption/ Description for AES-128 Vide Analytics: Accelerated Intrusion Detection Algorithm |
Yes |
| MISYS Global Risk | Regulatory compliance and enterprise wide risk transparency package | DataRisk analytics | Yes |
| Numerical Algorithms Group (NAG) | Analytics library for modeling valuation and risk for derivatives across multiple asset classes | Market standard models for all asset classes paired with the most efficient resolution methods (Monte Carlo simulations and Partial Differential Equations) | Single Only |
| QuantAlea’s Alea.cuBase F# | Random number generators, Brownian bridges, and PDE solvers | Monte Carlo and PDE solvers | Yes |
| RMS | F# package enabling a growing set of F# capability to run on a GPU | F# for GPU accelerators | Yes |
| SciComp, Inc | Derivative pricing (SciFinance) | Monte Carlo and PDE pricing models | Single Only |
| SunGard- Adaptiv Analytics | A flexible and extensible engine for fast calculations of a wide variety of pricing and risk measures on a broad range of asset classes and derivatives | Existing models code in C# supported transparently, with minimal code changes, Supports multiple backends including CUDA and OpenCL, Switches transparently between multiple GPUs and CPUS depending on the deal support and load factors | Yes |
| Synerscope- Synerscope Data Visualization | Visual big data exploration and insight tools | Graphical exploration of large network datasets including geo-spatial and temporal components | Single Only |
| Tanay ZX Lib (Fuzzy Logic) | Financial analytics and data mining library | Monte Carlo simulations, pricing of vanilla and exotic options, fixed income analytics, data mining | Yes |
| Xcelerit SDK | Software Development Kit (SDK) to boost the performance of Financial applications (e.g. Monte-Carlo, Finite-difference) with minimum changes to existing code | C++ programming language, cross- platform (back-end generates CUDA and optimized CPU code), supports Windows and Linux operating systems | Yes |
Data Science & Analytics
| Application | Description | Support Features | Multi-GPU |
|---|---|---|---|
| BIDMach - UC Berkeley | Fastest Big Data tools on the web. Holds the records for many common machine learning problems, on single nodes or clusters. Interactive environment for easily building and deploying machine learning models. |
Spreadsheet-like modeling interfaces, Python-based scripting environment and Grid middleware. | Yes |
| Blazegraph GPU | First and fastest GPU accelerated platform for graph query. It provides drop-in acceleration for existing RDF/Sparql and Tinkerpop/ Blueprints graph applications. It provides high-level graph database APIs with transparent GPU acceleration for graph query. | GPU-accelerated SPARQL graph query, Data Management using the RDF interchange model, Tinkerpop/Blueprints Graph Support, Billions of edges on a single multi-GPU node, SaaS and Appliance models available. | Yes |
| Blazegraph DASL | It marries the power and speed of CUDA. It delivers graph analytics at over 32 billion traversed edges per second and easily integrates with Spark and other data management platforms. | Scala-based graph analytic and machine learning application language, Ease of integration into Spark and Hadoop data ecosystems, Support for GPU cluster deployment. | Yes |
| GPUdb | A distributed database for many core devices. GPUdb is a scalable, distributed database with SQL-style query capability for Big Data. Full suite of geospatial calculation capability. |
Query against Big Data in real time. No pre-indexing allows for complex, ad-hoc query chains. Interactively explore large, streaming data sets. |
Yes |
| Gunrock | Gunrock is a library for graph processing on the GPU. Gunrock achieves a balance between performance and expressiveness by coupling high performance GPU implementations with a high-level programming model, that requires minimal GPU programming knowledge. | Direction-optimizing BFS, SSSP, PageRank, Connected Components, Betweenness- centrality. | Yes |
| Jedox | Helps with portfolio analysis, management consolidation, liquidity controlling, cash flow statements, profit center accounting, treasury management, customer value analysis and many more applications, all accessible in a powerful web and mobile application or Excel environment. | This database holds all relevant data in GPU memory and is thus an ideal application to utilize the Tesla K40’s 12 GB on-board RAM. Scale that up with multiple GPUs and keep close to 100 GB of compressed data in GPU memory on a single server system for fast analysis, reporting and planning. | Yes |
| MapD | MapD is GPU-powered big data analytics and visualization platform that is hundreds of times faster than CPU in-memory systems. | MapD uses GPUs to execute SQL queries on multi-billion row datasets and optionally render the results, all in milliseconds. | Yes |
| Sqream DB | GPU accelerated SQL database engine for big data analytics. Sqream speeds SQL analytics by 100X by translating SQL queries into highly parallel algorithms run on the GPU. | Up to 100TB of raw data can be stored and queried in a standard 2U server. Inserts and analyzes hundreds of billions of records in seconds. No indexes required. No changes to SQL code or data science paradigms required. | Yes |
Defence & Intelligence
| Application | Description | Support Features | Multi-GPU |
|---|---|---|---|
| Comprimato JPEG2000 Codec | A high performing, GPU powered, JPEG2000 encoder and decoder SDK which can be integrated into almost any application. | Very large image processing, specific area decoding, multi resolution/quality decoding supporting all GEOSPATIAL image formats. (eg NITF, BIIF). Mobile and embedded platform friendly. | Yes |
| DigitalGlobe - Advanced Ortho Series | Geospatial visualization. | Image orthorectification. | Yes |
| Elcomsoft | High-performance distributed password recovery software with NVIDIA GPU acceleration and scalability to over 10,000 workstations. | GPU acceleration for password recovery, 10-100x speedup for password recovery. | Yes |
| GPUdbEsri ArcGIS for Desktop (ArcMap and ArcGIS Pro) – Spatial Analyst and 3D Analyst | Determines the raster surface locations visible to a set of observer features, using geodesic methods. | Viewshed2 transforms the elevation surface into a geocentric 3D coordinate system and runs 3D sightlines to each transformed cell center. | Yes |
| Eternix - Blaze Terra | Geospatial visualization. | 3D visualization of geospatial data. | Yes |
| GeoWeb3d Desktop | Geospatial visualization. | 3D visualization of geospatial data. | Yes |
| GPUdb | Multi-GPU, Multi-Machine distributed object store providing SQL style query capability, advanced geospatial query capability,heatmap generation, and distributed rasterization services. | Query against big data in real time. No pre-indexing allows for complex, ad-hoc query chains. Interactively explore large, streaming data sets. |
Yes |
| Harris ENVI | Image Processing and Analytics. | Image orthorectification, Image transformation, atmospheric correction, Panchromatic co-occurrence texture filter. | Yes |
| Herta Security - BioSurveillance NEXT, BioFinder | Real time facial recognition and forensic alerts against multiple watchlists. | Supports crowded scenes, difficult lighting, faster than real-time analysis, partial face concealment. | Yes |
| Intergraph Motion Video Analyst | Video filters and mosaic'ing - Geo-fuses FMV analytics with intelligence data. | Full motion video ortho mosaic processing, de-hazing algorithms. | Single Only |
| Intuvision Panoptes 3.0 | Video analytics. | Object recognition and change detection. | Yes |
| LuciadLightspeed | Geospatial visualization and analysis. | Geospatial situational awareness. | Single Only |
| Manifold Systems | Full-featured GIS, vector/raster processing & analysis. | Manifold surface tools. | Yes |
| MotionDSP - Ikena ISR | Real-time full motion video (FMV) and wide-area motion imagery (WAMI) enhancement and computer-vision-based analytics software for intelligence analysts. | Real-time super-resolution-based video enhancement on live streams, geospatial visualization, target detection and tracking, and fast 2-D mapping. | Yes |
| NerVve Visual Search Solution (NVSS) | Video/Image Live and Forensic Search. | Video and image content search. | Yes |
| OpCoast SNEAK | Electromagnetic signals propagation modeling for complex urban and terrain environments. | Ray tracing, DTED and remote sensing inputs. | Yes |
| PCI Geomatics GXL | Image processing. | Image orthorectification and additional image processing. | Yes |
| Skyline Software - Terrabuilder PhotoMesh | PhotoMesh integrates a GPU-based, fast algorithm, able to automatically build 3D models from simple photographs. PhotoMesh revolutionizes the use of geospatial data by fully automating the generation of high-resolution, textured, 3D mesh models from standard 2D images. | 3D model building from imagery; building texture generation. | Yes |
Deep Learning & Machine Learning
| Application | Description | Support Features | Multi-GPU |
|---|---|---|---|
| BidMach | GPU-accelerated classical machine learning library. | Logistic regression, SVM, LDA, SFA, NMF, ICA, random forests, clustering, word2vec. | Yes |
| Caffe | The Caffe deep learning framework makes implementing state-of-the-art deep learning easy. | Process over 40M images per day with a single NVIDIA K40 or Titan GPU. | Single Only |
| Caffe* Parallel | This is a faster framework for deep learning, it's forked from BVLC/caffe (master branch). This allows data-parallel via MPI. | Using the GPU cluster processing mass image data. | Yes |
| Clarifai | Clarifai brings a new level of understanding to visual content through deep learning technologies. Clarifai uses GPUs to train large neural networks to solve practical problems in advertising, media, and search across a wide variety of industries. | GPU-based training and inference. Recognizes and indexes images with predefined classifiers, or with custom classifiers. | Yes |
| Chainer | DL framework that makes the construction of neural networks (NN) flexible and intuitive. | Dynamic NN construction, which makes debugging easier. CPU/GPU-agnostic coding, which is promoted by CuPy, partially NumPy-compatible multidimensional array library for CUDA. Data-dependent NN construction, which fully exploits the control flows of Python without magic. | Yes |
| CNTK | Microsoft’s Computational Network Toolkit (CNTK) is a unified computational network framework that describes deep neural networks as a series of computational steps via a directed graph. | Supports many applications, including Speech Recognition, Machine Translation, Image Recognition, Image Captioning, Text Processing and Relevance, Language Understanding, Language Modeling. | Yes |
| Deeplearning4j | Deeplearning4j is the most popular deep learning framework for the JVM, and includes all major neural nets such as convolutional, recurrent (LSTMs) and feedforward. | Integrates with Hadoop and Spark to run distributed. Java and Scala APIs. Composable framework that facilitates building your own nets. Includes ND4J, the Numpy for Java. | Yes |
| Dextro | Dextro's API uses deep learning systems to analyze and categorize videos in real-time. | Object and scene detection, Machine transcription for audio. Motion and movement detection. | Yes |
| IntelligentVoice | Far more than a transcription tool, this speech recognition software learns what is important in a telephone call, extracts information and stores a visual representation of phone calls to be combined with text/instant messaging and E-mail. Intelligent Voice's search and alert makes it possible to tackle issues before they arise, address data security concerns and monitor physical access to data. | Advanced Speech Recognition across large data sets, JumpTo Technology, for data visualisation, E-Discovery, extraction from phone calls, IM & Email defining key phrases and emotional analysis, Compliance, defining key conversations and interactions | Yes |
| Labellio | The world's easiest deep learning web service for computer vision, which allows everyone to build own image classifier with only web browser. | Neural net fine-tuning for image data, data crawling, data browsing as well as drag- and-drop style data cleansing backed by AI support. | Yes |
| MatConvNet | CNNs for MathWorks MATLAB, allows you to use MATLAB GPU support natively rather than writing your own CUDA code. | Building Blocks, Simple CNN wrapper, DagNN wrapper, cuDNN implemented. | Yes |
| MetaMind | Provides a deep learning API for image recognition and text sentiment analysis. Uses either prebuilt, public, or custom classifiers. | GPU-based training and inference. Recognizes image and analyzes text, creates and trains classifiers with tooling for uploading and managing datasets. | Yes |
| Neon | Neon is a fast, scalable, easy-to-use Python based deep learning framework that has been optimized down to the assembler level. Neon features a rich set of example and pre-trained models for image, video, text, deep reinforcement learning and speech applications. | Training, inference and deployment of deep learning models. Process over 442M images per day on a Titan X. | Yes |
| Theano | Theano is a symbolic expression compiler that powers large-scale computationally intensive scientific investigations. | Abstract expression graphs for transparent GPU acceleration. | Single Only |
| Tensorflow | Google’s TensorFlow is an open source software library for numerical computation using data flow graphs. Nodes in the graph represent mathematical operations, while the graph edges represent the multidimensional data arrays (tensors) communicated between them. | TensorFlow is flexible, portable and performant creating an open standard for exchanging research ideas and putting machine learning in products. | Yes |
| Torch7 | Torch7 is an interactive development environment for machine learning and computer vision. | Computational back-ends for multicore GPUs. | Single Only |
| Trakomatic OSense, Otrack | Video Analytics Solution for retail, supermarkets, shopping mall and banking. | People detection & tracking, Crowd density estimation, Gender classification and age estimation, Person re-identification. | Yes |
Manufacturing CAD
| Application | Description | Support Features | Multi-GPU |
|---|---|---|---|
| Altair AcuSolve | General purpose CFD software. | Linear equation solver. | Yes |
| ANSYS - Fluent | General purpose CFD software. | Radiation heat transfer model, linear equation solver. | Yes |
| Autodesk - Moldflow | Plastic mold injection software. | Linear equation solver. | Single Only |
| ANSYS - Polyflow | CFD software for the analysis of polymer and glass processing. | Direct Solvers. | Yes |
| CPFD Barracuda-VR and Barracuda | Fluidized bed modeling software. | Linear equation solver, particle calculations. | Single Only |
| DHI - MIKE 21 | 2D hydrological modelling of coast and sea. | Hydrodynamics; Advection-dispersion; sand and mud transport; coupled modelling; particle tracking; oil spill; ecological modelling; agent based modelling; various wave models. | Yes |
| DHI - MIKE FLOOD | 1D & 2D urban, coastal, and riverine flood modelling. | Hydrodynamics. | Yes |
| FluiDyna aeroFluidX | Incompressible single-phase CFD software. | Finite volume solver. | Yes |
| FluiDyna - Culises for OpenFOAM | Solver library for general purpose CFD software. | Linear equation solvers. | Yes |
| FluiDyna nanoFluidX | General purpose CFD software. | SPH solver. | Yes |
| FluiDyna ultraFluidX | General purpose CFD software. | Lattice-Boltzmann solver. | Yes |
| midas NFX(CFD) | General purpose CFD software based on FEM. | Linear equation solver (Iterative Solver and AMG Preconditioner). | Single Only |
| Numeca | Fine/ Turbo software product—a structured, multi-block, multi-grid CFD solver targeting the turbo machinery industry. | Multi-grid solver. | Yes |
| Prometech - Particleworks | Particle-based CFD software. | Implicit and explicit solvers. | Yes |
| Turbostream Ltd | CFD software for turbomachinery flows. | Explicit solver. | Yes |
| Vratis Speed IT FLOW | Incompressible single-phase CFD software. | Finite volume solver. | Single Only |
| Vratis SpeedIT for OpenFOAM | Solver library for general purpose CFD software. | Linear equation solvers. | Yes |
Design & Visualisation
| Application | Description | Support Features | Multi-GPU |
|---|---|---|---|
| Allegorithmic Substance Designer | Material shader edition, market reference for procedural texture creation. | Iray rendering including textures/ substances and bitmap texture export to render in any Iray powered compatible with MDL. | Yes |
| Allegorithmic Substance Painter | Intuitive interactive 3D painting software with physics and particle support. | Iray rendering to enhance all artwork released with the software. | Yes |
| Autodesk - AutoCAD | 2D and 3D CAD design, drafting, modeling, architectural drawing, and engineering software. Supports Open GL. Native DWG™ support. | Surface, mesh, and solid modeling tools, model documentation tools, parametric drawing capabilities. Native DWG™ support. GRID Support. | Single Only |
| Autodesk - AutoCAD Design Suite | AutoCAD 2014 software, plus tools to create, capture, connect, and showcase designs. | 2D/3D display of designs, interactive 3D presentation with realistic materials, rendering-ray tracing. | Single Only |
| Autodesk - 3DS Max | 3D animation creative toolset for modeling, animation, simulation, and rendering for product and building designs. | 3D modeling, mesh and surface modeling, improved Nitrous viewport performance, iray rendering. | Yes |
| Autodesk - Inventor | 3D mechanical design, documentation, and product simulation. | Uses BIM for intelligent building components to improve design accuracy. | Single Only |
| Autodesk - Revit | Building Information Modeling (BIM) for architecture, engineering, and construction. | Modeling (BIM) to design, build, and maintain higher-quality, more energy- efficient buildings. GRID support. | Single Only |
| Chaos Group - V-Ray RT | GPU renderer. | CUDA interactive GPU rendering. | Yes |
| Cast Software - WYSIWYG | The WYSIWYG software products, designed specifically for lighting professionals, offers a range of solutions to meet the needs of designers, assistants, electricians, console operators, teachers, and students. | The speed of wysiwyg’s Shaded Views depends entirely on GPU, the GPU will have an easier time rendering ten risers consolidated into one Mesh, than rendering them as individual risers, Wysiwys also support NVIDIA SLI technologies. | Yes |
| Dassault Systèmes - CATIA | Accelerated UI rendering. | Full OpenGL implementation including menus and dialog box. | Single Only |
| Dassault Systèmes - CATIA Live Rendering | Realistic 3D Rendering on full CATIA 3D CAD model. | Physically Based Rendering with no data preparation thanks to native NVIDIA Iray Photoreal integration integration and interactive realistic rendering using NVIDIA Iray IRT. | Yes |
| Dassault Systèmes - 3DEXCITE DeltaGen | Redefines high-end 3D visualization and realtime interaction. This latest version gives users a broad suite of robust new features to truly revolutionize processes and help increase visual quality, speed, and flexibility. | Interactive ray tracing and global illumination. Integration with Siemens TeamCenter. Cluster support Realtime & Offline Production Process Integration and scene building. Scene Analysis, Xplore DeltaGen, SDK for DeltaGen. | Yes |
| Dassault Systèmes - SOLIDWORKS | Covers all aspects of product development process with a seamless, integrated workflow - design, verification, sustainable design, communication and data management. | High performance in Shaded, Shaded w/ Edges, and RealView modes, FSAA for sharp edges, Order Independent Transparency. Real time photorealistic renderings with SOLIDWORKS Visualize, an Iray-based application. | Single Only |
| Dassault Systèmes – SOLIDWORKS Visualize | Easy to use photorealistic rendering software. | Iray-based ray-tracing, animation support, network rendering. | Yes |
| NVIDIA Iray | A ready-to-integrate, physically-based, photorealistic rendering solution. | Iray Interactive; Iray Photoreal; Iray Cluster. Fast interactive ray tracing; Physically- based, global-illumination rendering; Distributed cluster rendering. | Yes |
| Otoy - Octane Render | GPU renderer. | GPU rendering. | Yes |
| PTC Creo Parametric | Parametric design solution suite. | Anti-aliasing, better lighting and enhanced shaded-with-edges mode. Immersive design environment with realistic materials. GRID Support. | Single Only |
| Siemens PLM Software NX and Teamcenter | Product lifecycle management solutions from design to simulation to production to service. | Design software, NX, and PLM viewer applications, TcVis and Active Workspace. GRID support. | Single Only |
| Top Systems T-FLEX CAD | 3D and 2D parametric design, simulation, photorealistic rendering. | High performance visualization, real time photorealistic rendering. | Yes |
| VRED | VRED™ 3D visualization software helps automotive designers and engineers create product presentations, design reviews, and virtual prototypes. Use Digital Prototyping to quickly visualize ideas and evaluate designs. | Enhanced geometry behavior, Automotive product interoperability, Navigation in a scene, Import Alias layer structure, Asset Manager improvements, Integrated file converter, Analytic rendering modes, Gap Analysis tool, Oculus Rift support, Animation module, Multiple rendering modes, Subsurface scattering, Displacement mapping. | Yes |
Media & Entertainment
| Application | Description | Support Features | Multi-GPU |
|---|---|---|---|
| 3DAliens- Glu3d | SPH fluid simulation. | Faster simulation. | Single Only |
| AAA Studio - FurryBall | GPU renderer. | CUDA and DirectX GPU rendering. | Single Only |
| Autodesk - 3ds Max + NVIDIA iray | 3D modeling, animation, and rendering. | Iray interactive, photorealistic and physically correct rendering. | Yes |
| Autodesk - Maya | 3D modeling, animation, and rendering. | Increased model complexity, larger scenes. | Yes |
| Autodesk - Motion Builder | Character animation and motion capture. | Increased model complexity at interactive rates. | Single Only |
| Autodesk - Mudbox | 3D sculpting. | Increased model complexity at interactive rates. | Single Only |
| Blastcode - Kilton/ Megaton | Physics-based simulation plug in. | Faster simulation. | Single Only |
| Cebas - moskitoRender | GPU renderer. | CUDA-based GPU rendering. | Yes |
| Chaos Group - V-Ray RT | GPU renderer. | CUDA interactive GPU rendering. | Yes |
| Jawset - TurbulenceFD | Physics-based simulation plug-in. | Maximus supported GPU simulation using CUDA. | Single Only |
| Maxon - Cinema 4D | 3D modeling, animation, and rendering. | Increased model complexity at interactive rates. | Single Only |
| NewTek - Lightwave | 3D modeling, animation, and rendering. | Increased model complexity at interactive rates. | Single Only |
| Otoy - Octane Render | GPU renderer. | GPU rendering. | Yes |
| Pixologic - Sculptris | 3D sculpting. | Increased model complexity at interactive rates. | Single Only |
| Redshift - Renderer | GPU-accelerated, biased renderer. | CUDA-based GPU final-frame rendering. | Yes |
| Side Effects - Houdini | 3D modeling, animation, and rendering. | Maximus supported GPU simulation using OpenCL. | Single Only |
| The Foundry - Mari | 3D paint. | Increased model complexity at interactive rates. | Single Only |
| The Foundry - Modo | 3D modeling, animation and rendering. | Increased model complexity, larger scenes. | Single Only |
Oil & Gas
| Application | Description | Support Features | Multi-GPU |
|---|---|---|---|
| Acceleware AxRTM AxKTM |
Seismic processing. | RTM, Kirchhoff, control source, electromagnetism, forward modeling. | Yes |
| BRS Labs AISight for SCADA | Proactive integrity management and real- time precursor alerts for enhanced SCADA operations in oil and gas. | 24/7 real-time analysis and alerting scaling to thousands of sensors across remote and geographically dispersed locations including historical analysis and trend reports. | Yes |
| CGG - GeoVation | Seismic processing. | Multiple algorithms (RTM, etc). | Yes |
| CGG- Inside Earth | Seismic interpretation. | Horizon orientation attributes; automated fault extraction, Curvature Attributes. | Yes |
| Echelon Stoneridge Technology | Reservoir simulator. | Fully GPU-accelerated reservoir model, including dual-perm, dual porosity, pressure varying perm and porosity. Eclipse compatible input deck. | Yes |
| Esri ArcGIS for Desktop (ArcMap and ArcGIS Pro) – Spatial Analyst and 3D Analyst | Determines the raster surface locations visible to a set of observer features, using geodesic methods. | Viewshed2 transforms the elevation surface into a geocentric 3D coordinate system and runs 3D sightlines to each transformed cell center. | Yes |
| ffA Geoteric | Seismic interpretation. | Attributes calculations, geobodies extraction. | Yes |
| ffA SEA3D Pro | Seismic interpretation. | Attributes calculations, geobodies extraction. | Yes |
| ffA SVI Pro | Seismic interpretation. | Attributes calculations, geobodies extraction. | Yes |
| GeoMage Multifocusing | Seismic processing. | Advanced seismic imaging technologies and services, as well as interpretation, geological modeling, and reservoir characterization. | Yes |
| HUE Headwave Suite | Seismic interpretation. | Attributes calculations, Volume Rendering. | Yes |
| HUE HUEspace | Seismic interpretation. | Interpretation development platform. | Yes |
| OpenGeo Solutions OpenSeis | Seismic processing. | Spectral Decomposition. | Yes |
| Panorama Tech | Seismic processing, Modeling. | Multiple algorithms (RTM, etc). | Yes |
| Paradigm Echos RTM | Seismic processing. | RTM algorithm. | Yes |
| Paradigm Geophysical VoxelGeo | Seismic interpretation. | Volume Rendering, Horizon Flattening. | Yes |
| Paradigm SKUA | Reservoir modeling. | Faults, Horizons and Flow Simulation Grid. | Yes |
| PumaFlow IFP | Reservoir simulation. | GPU-accelerated linear solver. | Yes |
| Ridgeway Kite Simulator | Reservoir simulation. | Fully GPU-accelerated reservoir model, including surface facilities and multiple realization history matching. | Yes |
| Roxar RMS | Reservoir modeling. | Multi GPU capabilities via HUEspace. | Yes |
| Schlumberger Omega2 RTM | Seismic processing. | Multiple algorithms (RTM, etc). | Yes |
| Seismic City Prestack Interpretation | Seismic processing. | Multiple algorithms (RTM, etc). | Yes |
| SpectraSeis | Seismic processing. | Full elastic wave-equation imaging and analysis of microseismic fracture data. | Yes |
Higher Education & Supercomputing
| Application | Description | Support Features | Multi-GPU |
|---|---|---|---|
| Arioc | High-throughput read alignment with GPU- accelerated exploration of the seed-and- extend search space. | Single-end alignment, paired-end alignment • Output in SAM or database-ready binary formats • Multiple GPU implementation. |
Yes |
| BarraCUDA | Sequence mapping software. | Alignment of short sequencing reads, alignment of indels with gap openings and extensions. | Yes |
| BEAGLE-lib | BEAGLE is a high-performance library that can perform the core calculations at the heart of most Bayesian and Maximum Likelihood phylogenetics packages. It can make use of highly-parallel processors such as those in graphics cards (GPUs) found in many PCs. | Evaluation of likelihood for sequence evolution on trees and Arbitrary models (e.g. nucleotide, amino acid, codon) Speed-ups (over CPU only version): nucleotide model = up to 25x codon model = up to 50x. |
Yes |
| Campaign | An open-source library of GPU-accelerated data clustering algorithms and tools. | -means (and Kps-means, a K-means variant for GPUs with parallel sorting for improved performance), K-medoids, K-centers (a K-medoids variant in which medoids are placed only once according to a heuristic), Hierarchical clustering and Self-organizing map. | Single Only |
| CUDASW++ | Open source software for Smith-Waterman protein database searches on GPUs. | Parallel search of Smith-Waterman database. | Yes |
| CUSHAW | Parallelized short read aligner. | Parallel, accurate long read aligner for large genomes. | Yes |
| G-BLASTN | GPU-accelerated nucleotide alignment tool based on the widely used NCBI-BLAST. | Blastn and megablast modes of NCBI- BLAST. | Single Only |
| GPU-Blast | Local search with fast k-tuple heuristic. | Protein alignment according to BLASTP. | Single Only |
| mCUDA-MEME | Ultrafast scalable motif discovery algorithm based on MEME. | Scalable motif discovery algorithm based on MEME. | Yes |
| MUMmer GPU | High-throughput local sequence alignment program. | Aligns multiple query sequences against reference sequence in parallel. | TBD |
| NVBIO | NVBIO is an open source C++ library of reusable components designed to accelerate bioinformatics applications using CUDA. | RTMData structures, algorithms, and utility routines useful for building complex computational genomics applications on CPU-GPU systems. | Yes |
| NVBowtie | A largely complete implementation of the Bowtie2 aligner on top of NVBIO. | Good coverage of Bowtie2 features and comparable quality results. | Yes |
| PEANUT | Read mapper for DNA or RNA sequence reads to a known reference genome. | Achieves supreme sensitivity and speed compared to current state of the art read mappers like BWA MEM, Bowtie2 and RazerS3. PEANUT reports both only the best hits or all hits. | Single Only |
| REACTA | SeismicA modified version of GCTA with improved computational performance, support for Graphics Processing Units (GPUs), and additional features. The purpose of REACTA is to quantify the contribution of genetic variation to phenotypic variation for complex traits. | GRM creation, REML analysis, Regional Heritability (including multi-GPU). | Yes |
| SeqNFind | SeqNFind® is a powerful tool suite that addresses the need for complete and accurate alignments of many small sequences against entire genomes utilizing a unique hardware/software cluster system for facilitating bioinformatics research in Next Generation sequencing and genomic comparisons. | Hardware and software for reference assembly, blast, SW, HMM, de novo assembly. | Yes |
| SOAP3 | GPU-based software for aligning short reads with a reference sequence. It can find all alignments with k mismatches, where k is chosen from 0 to 3. | Short read alignment tool that is not heuristic based; reports all answers. | Yes |
| SOAP3-dp | SOAP3-dp: Ultra-fast GPU-based tool for short read alignment via index-assisted dynamic programming. | Borrows-Wheeler Transformation, Dynamic Programming. | Yes |
| UGene | Open source Smith-Waterman for SSE/ CUDA, Suffix array based repeats finder and dotplot.. | Fast short read alignment. | Yes |
| WideLM | Fits numerous linear models to a fixed design and response. | Parallel linear regression on multiple similarly-shaped models. | Yes |
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